D. sechellia microsatellites (not mapped)
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D. melanogaster |
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D.simulans |
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D.sechellia |
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D. mauritiana |
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| Locus |
Repeat |
cyt. location |
No. alleles |
Het. |
Variance |
Size range |
No. alleles |
Het. |
Variance |
size range |
No. alleles |
Het. |
Variance |
Size range |
No. alleles |
Het. |
Variance |
Size range |
Annealing temp. |
Primer forward |
reverse |
internal reference |
| sec 1 |
(AG)10
|
|
6 |
0.70 |
2.59 |
196-212 |
4 |
0.77 |
1.28 |
200-206 |
2 |
0.07 |
0.04 |
202-204 |
2 |
0.45 |
0.23 |
198-200 |
53 |
cggagagtggagattcgagag |
ggcccatgcgttcgtgtgtcg |
294 / 295 |
| sec 3 |
(GT)9
|
|
1 |
0.00 |
0.00 |
148 |
7 |
0.81 |
17.89 |
146-174 |
1 |
0.00 |
0.00 |
151 |
6 |
0.85 |
5.49 |
146-160 |
55 |
gtttccccaacgctgcgtgtg |
agtccaacttttgcctcagtc |
298 / 299 |
| sec 6 |
(AG)20
|
|
4 |
0.56 |
0.42 |
132-138 |
5 |
0.69 |
4.51 |
122-143 |
8 |
0.83 |
9.86 |
138-166 |
2 |
0.09 |
0.05 |
124-126 |
50 |
taaaataagggatcaaaagtc |
gcgcgtataatcacatatttc |
300 / 301 |
| sec 7 |
(GT)9
|
|
9 |
0.74 |
34.90 |
159-191 |
5 |
0.76 |
4.26 |
145-155 |
1 |
0.00 |
0.00 |
149 |
4 |
0.64 |
2.76 |
143-155 |
50 |
ggtatggtcgaaagaaatatc |
taactgtggctattttggtgac |
302 / 303 |
| sec 9 |
(GT)9
|
|
1 |
0.00 |
0.00 |
142 |
2 |
0.28 |
0.04 |
138-139 |
2 |
0.07 |
0.14 |
137-141 |
2 |
0.26 |
0.03 |
138-139 |
48 |
ttaataacattccaggagttg |
caaacaccaaaaaaccgtgta |
356 / 357 |
| sec 12 |
(GT)10
|
|
4 |
0.55 |
0.74 |
108-120 |
6 |
0.78 |
2.79 |
106-120 |
4 |
0.27 |
1.38 |
106-115 |
3 |
0.69 |
0.76 |
108-112 |
55.5 |
aaatcagcagggctgccaaac |
cgcacgcatacaaaagcatac |
358 / 359 |
| sec 13 |
(GT)7GG(GT)3
|
|
8 |
0.63 |
11.58 |
136-173 |
3 |
0.23 |
0.32 |
136-142 |
2 |
0.52 |
0.26 |
134-136 |
4 |
0.40 |
1.04 |
128-140 |
51 |
aatacatttaccatttgttag |
tacacagacacacaggattac |
360 / 361 |
Last Updated on 14.07.1999